applications present in swarm..
what are they ???
where are they ???
how to run them ???
raw data -> repeat masker -> pace -> cap3 -> blast
repeat masker is used to eliminate the junk est's
pace is used to cluster the est's (organizing the est's into groups)......learn about talon
cap3 is used to create a sequence from the cluster .
blast is used to compare the sequence with the data present in database and intimate what kind of sequence it is. which gene it is ..........